Advanced Pipeline Development


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This advanced Viash course enhances your skills in parameterization, templating, and workflow composition, and teaches integration with the Nextflow scientific computing workflow management system.

Target Audience

  • Computational Researchers
  • Bioinformaticians
  • IT Developers



Course Overview

Module 1: Advanced Concepts in Data Pipeline Architecture

  • Review of Pipeline Fundamentals
  • Complex Pipeline Architectures

Module 2: Deep Dive into Viash Functionality

  • Advanced Features of Viash
  • Custom Components and Modularity

Module 3: Integrating Diverse Data Types and Sources

  • Handling Heterogeneous Data
  • Data Source Integration

Module 4: Pipeline Optimization and Performance Tuning

  • Performance Analysis
  • Optimization Techniques

Module 5: Automation and Continuous Integration/Continuous Deployment (CI/CD)

  • Automating Pipeline Processes
  • Implementing CI/CD in Pipeline Development

Module 6: Case Studies and Real-World Applications

  • Complex Use Cases
  • Industry and Research Application


  • Advance participants’ understanding and skills in complex data pipeline development.
  • Provide deep insights into the optimization and management of high-performance pipelines in bioinformatics.
  • Equip participants with the ability to integrate advanced tools and techniques into their pipeline development processes.

Required skills

  • A solid foundation in data pipeline development with Viash and a good understanding of bioinformatics, data analysis, and scripting languages. Prior experience with pipeline development with Viash, is highly recommended.


Participants of the “Advanced Data Pipeline Development” course will emerge with a profound expertise in creating, optimizing, and managing sophisticated data pipelines. They will gain practical knowledge in handling complex data types, integrating advanced features, and implementing automation and CI/CD in pipeline workflows. This course is aimed at empowering professionals to tackle the most challenging aspects of data pipeline development in the evolving field of bioinformatics and biotechnological research.


  • Robrecht Cannoodt
  • Toni Verbeiren


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Elevate your data workflows

Transform your data workflows with Data Intuitive’s complete support from start to finish.

Our team can assist with defining requirements, troubleshooting, and maintaining the final product, all while providing end-to-end support.

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